PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID EcC021590.10
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Myrtales; Myrtaceae; Myrtoideae; Eucalypteae; Eucalyptus
Family B3
Protein Properties Length: 149aa    MW: 16885.5 Da    PI: 8.6157
Description B3 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
EcC021590.10genomeECGDView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1B359.17.6e-1938126298
                   EEE-..-HHHHTT-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEEEE- CS
            B3   2 fkvltpsdvlksgrlvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvvkvfr 98 
                   +k ++ps+v+   +l lpkkf++ h   +++++t+tledes++ +e+k+   + + +  l++GW++F  a++L+egD +vF+l++ ++f  +v ++r
  EcC021590.10  38 VKHMLPSHVTGGFWLGLPKKFCDLHL--PQQDVTITLEDESSKGYEIKY--LGAKMG--LSGGWRGFSIAHNLQEGDALVFQLVKPTRF--KVIICR 126
                   58899*****************8885..35899****************..777755..9**********************9986777..888887 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:2.40.330.103.2E-2129126IPR015300DNA-binding pseudobarrel domain
SuperFamilySSF1019366.87E-2430126IPR015300DNA-binding pseudobarrel domain
CDDcd100171.24E-2635126No hitNo description
PROSITE profilePS5086312.66137128IPR003340B3 DNA binding domain
SMARTSM010191.4E-1837128IPR003340B3 DNA binding domain
PfamPF023628.5E-1738126IPR003340B3 DNA binding domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 149 aa     Download sequence    Send to blast
PKRERAADDE YGTASANDAL DRAKRIQSTL SPEYPVMVKH MLPSHVTGGF WLGLPKKFCD  60
LHLPQQDVTI TLEDESSKGY EIKYLGAKMG LSGGWRGFSI AHNLQEGDAL VFQLVKPTRF  120
KVIICRAFSI MYNISFFATP ECVRFCFYR
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_010068473.13e-84PREDICTED: B3 domain-containing protein Os01g0234100-like
TrEMBLA0A059BDN99e-85A0A059BDN9_EUCGR; Uncharacterized protein
STRINGGLYMA01G45623.16e-45(Glycine max)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G19184.14e-41B3 family protein